MDPath Classes and Functions

This page gives an overview of the different calsses and function contained in MDPath. For detailed ussage of each class or function, please refer to the respective page.

Main Modules

• MDPath — MD signal transduction calculation and visualization — mdapth.mdpath
  • Functions
• MDPath Tools — mdpath.mdapth_tools
  • Functions

Utility Modules

• Bootstrap Analysis — mdpath.src.bootstrap
  • Classes
• Clustering — mdpath.src.cluster
  • Classes
• Graph — mdpath.src.graph
  • Classes
• Mutual Information Calculation — mdpath.src.mutual_information
  • Classes
• Notebook Visualization — mdpath.src.notebook_vis
  • Classes
• Structure Calculations — mdpath.src.structure
  • Classes
• Visualization — mdpath.scr.visualization
  • Classes